Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015849520.1_cds_XP_016510806.1_23608
CDS Infomation

[gene=LOC107828070] [db_xref=GeneID:107828070] [protein=calcium-dependent protein kinase 8-like] [protein_id=XP_016510806.1] [location=join(944..1441,2573..2696,2792..2935,3057..3209,3315..3430,3705..3872,4499..4729,4960..5112)] [gbkey=CDS]
Sequence

ATGGGTAATTGCTGTGTGAAACCCGGTAAATCTGCTGAAAAAAAGAAGAACAAAAAGAAC
AAACCAAACCCCTTTTCAATTGATTATGGGGAATCTGGGGGTGGAGTTAAGCTTGTTGTA
TTGAAAGAACCAACAGGGCAGAACATACACGACAAGTATGATTTGGGTCGTGAGCTCGGA
AGAGGAGAATTCGGGGTTACTTACCTATGCACTGATGTGGACACAGGCGATAAGTATGCC
TGCAAATCGATATCCAAAAAGAAGCTAAGGACTGCAGTCGATATCGATGATGTTAGGAGA
GAGGTTGAGATCATGAAGCATTTGCCTAAGCATCCTAATATTGTGACTTTGAAGGATACA
TATGAGGATGATAATGCCGTGCACATTGTGATGGAACTGTGTGAGGGTGGTGAGTTGTTT
GACCGTATCGTAGCTAGAGGTCACTATACCGAGAGGGCAGCTGCTGGAATTTTGAGGACT
GTCGTTGAAGTCGTTCAGATGTGTCACAGGCATGGGGTTATGCATCGTGATCTCAAACCT
GAGAACTTTCTTTTTGGTAACAAAAAAGAAACAGCTCCACTGAAAGCAATTGACTTTGGG
TTGTCAGTTTTCTTTAAACCTGGGGAACGCTTTAATGAGATAGTGGGAAGTCCTTATTAC
ATGGCTCCAGAGGTTCTAAAGCGTAATTATGGACCAGAGGTTGACGTCTGGAGTGCTGGA
GTTATACTCTACATTCTTCTTTGTGGCGTTCCACCCTTCTGGGCAGAGACTGAACAAGGA
GTAGCCCAAGCAATTATTCGTTCTGTGATTGATTTCAAGAGGGATCCATGGCCTAAAGTT
TCTGATAATGCAAAGGATCTTGTAAAGAAAATGCTTGATCCAGATCCAAGTCGACGGCTC
ACAGCTGAGCGAGTTCTTGAGCATCCCTGGTTACAAAATATAAAGAAAGCACCAAACGTC
TCACTGGGTGAGACTGTAAAAGCAAGGCTCAAGCAGTTTTCAGTGATGAACAAGCTCAAG
AAAAAAGCTCTAACGGTTATAGCTGAGTTTTTGTCTGCAGAGGAAGTGGCGGGAATGAGG
GACGCATTTGAAATGATGGATACTGGAAAGAAGGGCCAGATAAACCTTGGAGAACTTAAA
AATGGTTTGCAGAAGCTTGGCCATCAGAGCTCTGATGCTGATCTTCAGATTCTCATGGAA
GCTGCCGATGTTGATGGAGATGGAAGTTTAAATTATGCTGAATTCGTTGCTGTATCTGTT
CATCTTAGAAAGATGGCTAATGACGAACACCTGCACAAAGCATTTTCATTTTTCGACAAA
AACCAGAGTGGTTACATTGAAATCGAAGAGCTCCGTAGTGCCTTGAGCGATGAGGACGAC
AACAATAGTGAGGAAGTCATCAATGCCATTATGCATGATGTTGACACAGATAAGGATGGT
TGCATTAGTTACGACGAATTTGCTGCGATGATGAAGGCTGGTACGGATTGGAGAAAAGCA
TCGCGACAGTATTCTCGCGAACGTTTTAACAGCCTCAGCTTAAAATTGATGAGGGATGGC
TCGTTACAACTCGAAAACAAAGCCTAG

Peptide Sequence

PEP ID

XP_016510806.1
PEP Infomation

PREDICTED: calcium-dependent protein kinase 8-like [Nicotiana tabacum]
Sequence

MGNCCVKPGKSAEKKKNKKNKPNPFSIDYGESGGGVKLVVLKEPTGQNIHDKYDLGRELG
RGEFGVTYLCTDVDTGDKYACKSISKKKLRTAVDIDDVRREVEIMKHLPKHPNIVTLKDT
YEDDNAVHIVMELCEGGELFDRIVARGHYTERAAAGILRTVVEVVQMCHRHGVMHRDLKP
ENFLFGNKKETAPLKAIDFGLSVFFKPGERFNEIVGSPYYMAPEVLKRNYGPEVDVWSAG
VILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSDNAKDLVKKMLDPDPSRRL
TAERVLEHPWLQNIKKAPNVSLGETVKARLKQFSVMNKLKKKALTVIAEFLSAEEVAGMR
DAFEMMDTGKKGQINLGELKNGLQKLGHQSSDADLQILMEAADVDGDGSLNYAEFVAVSV
HLRKMANDEHLHKAFSFFDKNQSGYIEIEELRSALSDEDDNNSEEVINAIMHDVDTDKDG
CISYDEFAAMMKAGTDWRKASRQYSRERFNSLSLKLMRDGSLQLENKA

Transcript Sequence

Gene sequence data has not been registered.